21482 NADH-u_ox-rdaseThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21482	chr_2	NADH-u_ox-rdase	1984041	1985071	-	NADH-u_ox-rdase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452488	Thaps21482.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0181

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0182	0.48	0.011 8

Most Highly Correlated Transcripts

25040 NA 0.9449	bd258 (bd258) HU 0.9242	20945 Tim17 0.9216	39497 Sar1 0.9174	22673 NA 0.9155	31113 Cyt_c_Oxidase_VIb 0.9104
5074 hypothetical protein 0.9099	268343 NA 0.9087	23960 hypothetical protein 0.8982	3229 hypothetical protein 0.8936

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADH-u_ox-rdase		NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; This family is the N-terminal domain of...	cl11377	79.5948	2.58E-20	5 - 83	specific	256164
NADH-u_ox-rdase superfamily		NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; This family is the N-terminal domain of...	-	79.5948	2.58E-20	5 - 83	superfamily	264341

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_46858	PHATR_46858	154018	311867	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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