21585 Zip superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21585 chr_3 Zip superfamily 41610 43987 - Zip superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452784 Thaps21585.2, Thaps21585.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0128
 0.43

Most Highly Correlated Transcripts

bd1692

(bd1692) NA
0.8759

bd381

(bd381) NA
0.8242

24382

PseudoU_synth_RluCD_like
0.7797

bd524

(bd524) NA
0.7786

bd1840

(bd1840) NA
0.778

bd1877

(bd1877) NA
0.7744

bd780

(bd780) NA
0.771

4070

cysteine_hydrolases
0.7702

bd885

(bd885) NA
0.7604

270378

hypothetical protein
0.7601

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Zip superfamily ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal... - 77.0051 1.23E-15 519 - 683 superfamily 260422

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1621 PHATRDRAFT_bd1621 236333 302961 442334 Not available Not available 252770

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 GO:0030001 GO:0046873 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0030001

metal ion transport

Details: 
The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0046873

metal ion transmembrane transporter activity

Details: 
Catalysis of the transfer of metal ions from one side of a membrane to the other.
GO Category: 
MF

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