2206 RRM_SF superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2206	chr_2	RRM_SF superfamily	433865	434467	+	RRM_SF superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448651	Thaps2206.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0401

Most Highly Correlated Transcripts

7628 hypothetical protein 0.8901	2731 hypothetical protein 0.877	37100 Zn-ribbon_RPC11 0.8725	261808 HA 0.8665	954 hypothetical protein 0.8532	260922 Leu_Phe_trans superfamily 0.8487
22634 hypothetical protein 0.8483	18662 ADK 0.8468	29950 PTZ00018 0.8463	30533 Kin17_mid 0.8454

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RRM_SF superfamily		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	-	73.4645	2.67E-17	43 - 147	superfamily	266524

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	283954	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003676 -

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