22472 Nucleotid_trans superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22472	chr_4	Nucleotid_trans superfamily	2170669	2173372	+	Nucleotid_trans superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452238	Thaps22472.9, Thaps22472.2, Thaps22472.7, Thaps22472.4, Thaps22472.8, Thaps22472.5, Thaps22472.10, Thaps22472.1, Thaps22472.3, Thaps22472.6

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0083

Most Highly Correlated Transcripts

2122 GIY-YIG_SLX1 0.8146	22107 hypothetical protein 0.8135	34629 Rad10 superfamily 0.8079	9462 hypothetical protein 0.8057	262632 Glyco_tranf_GTA_type superfamily 0.8051	plastidpF 0.8022
2733 hypothetical protein 0.8011	24656 U-box superfamily 0.8	8414 NA 0.7967	8322 DUF1237 superfamily 0.7954

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nucleotid_trans superfamily		Nucleotide-diphospho-sugar transferase; Proteins in this family have been been predicted to be...	-	84.6848	1.14E-18	324 - 538	superfamily	251929

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50412	PHATRDRAFT_50412	231158	287438	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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