22944 DUF747
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22944 chr_5 DUF747 2280265 2284116 + DUF747

Synonyms

NCBI ID Ensembl Genomes exon ID
7442318 Thaps22944.4, Thaps22944.2, Thaps22944.1, Thaps22944.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0236
 0.32

Most Highly Correlated Transcripts

23462

hypothetical protein
0.9055

ThpsCp110

(rpl6) ribosomal protein L6
0.8982

24462

(NTT2) hypothetical protein
0.8981

ThpsCp096

(rpl4) ribosomal protein L4
0.8898

6610

hypothetical protein
0.8856

15259

(RS1) PRK07400
0.8842

21419

hypothetical protein
0.884

ThpsCp134

(rpl34) ribosomal protein L34
0.8819

ThpsCp082

(rpl34) ribosomal protein L34
0.8773

ThpsCp097

(rpl23) ribosomal protein L23
0.8721

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF747 superfamily Eukaryotic membrane protein family; This family is a family of eukaryotic membrane proteins. It was... - 244.531 1.83E-72 833 - 1157 superfamily 253161
DUF747 superfamily Eukaryotic membrane protein family; This family is a family of eukaryotic membrane proteins. It was... - 244.531 1.83E-72 833 - 1157 superfamily 253161

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34116 PHATRDRAFT_34116 267150 67980 247082 Cre02.g091000.t1.2 AT1G67960.1 506739

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004308 -

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

Add comment

Log in to post comments