23295 Trp_Tyr_perm superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23295 chr_6 Trp_Tyr_perm superfamily 1810124 1811854 + Trp_Tyr_perm superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446337 Thaps23295.2, Thaps23295.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0417

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

bd1934

(bd1934) NA
0.9467

bd690

(bd690) NA
0.9173

bd643

(bd643) NA
0.9086

bd877

(bd877) NA
0.901

bd738

(bd738) NA
0.8655

bd1801

(bd1801) NA
0.8645

bd1806

(bd1806) AAT_I superfamily
0.8595

bd1813

(bd1813) NA
0.8516

bd1840

(bd1840) NA
0.8489

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8425

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trp_Tyr_perm superfamily Tryptophan/tyrosine permease family; Tryptophan/tyrosine permease family. - 90.037 7.68E-20 116 - 475 superfamily 266625

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45852 PHATRDRAFT_45852 260134 174394 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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