23751 TYW3 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23751	chr_8	TYW3 superfamily	547486	550857	-	TYW3 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450162	Thaps23751.2, Thaps23751.3, Thaps23751.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0329

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0195	0.28	0.52 1.7

Most Highly Correlated Transcripts

264633 SERPIN 0.8833	bd877 (bd877) NA 0.8779	36650 hypothetical protein 0.8626	21222 SrmB 0.8536	bd409 (bd409) Snf7 superfamily 0.8529	bd895 (bd895) NA 0.8492
3398 hypothetical protein 0.847	25120 U3_assoc_6 superfamily 0.836	bd1667 (bd1667) Mpp10 0.8271	264632 COG0826 0.8269

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TYW3 superfamily		Methyltransferase TYW3; The methyltransferase TYW3 (tRNA-yW- synthesising protein 3) has been...	-	125.768	1.35E-32	97 - 344	superfamily	260574

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_33584	PHATR_33584	251007	182233	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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