23865 CE4_SF superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23865	chr_8	CE4_SF superfamily	1094835	1096582	+	CE4_SF superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452359	Thaps23865.1, Thaps23865.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0320

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0100	0.39	4.5 0.21

Most Highly Correlated Transcripts

21802 hypothetical protein 0.8788	36650 hypothetical protein 0.8535	4038 hypothetical protein 0.8459	23105 Peptidase_S74 0.8403	24445 hypothetical protein 0.8382	10533 hypothetical protein 0.83
12821 (Sig1) hypothetical protein 0.8255	262731 hypothetical protein 0.8245	23897 hypothetical protein 0.8175	25434 PRK00142 0.8159

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CE4_SF superfamily		Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily; The carbohydrate...	-	171.655	1.00E-48	305 - 550	superfamily	265761

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	188581	97189	449933	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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