24141 FH2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24141 chr_10 FH2 superfamily 326912 339003 + FH2 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

24604

hypothetical protein
0.9361

25270

hypothetical protein
0.9154

5001

SNF2_N
0.9115

24891

zf-CW
0.9113

5760

SART-1
0.9106

21568

hypothetical protein
0.9105

22442

CHD
0.9105

23469

Plus-3
0.9081

261324

PLN02724
0.903

23979

zf-HC5HC2H superfamily
0.9018

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FH2 superfamily Formin Homology 2 Domain; Formin Homology 2 Domain. - 226.394 4.73E-64 2486 - 2904 superfamily 268111

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46058 PHATRDRAFT_46058 256560 212264 434678 Cre03.g166700.t1.1 Not available 565908

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0003779 GO:0016043 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0003779

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

GO:0016043

cellular component organization

Details: 
A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO Category: 
BP

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