24177 FimPThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24177	chr_10	FimP	540856	543185	+	FimP

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446845	Thaps24177.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0292

Most Highly Correlated Transcripts

9017 hypothetical protein 0.9207	10398 hypothetical protein 0.9085	10487 hypothetical protein 0.9028	23560 hypothetical protein 0.8985	8376 hypothetical protein 0.893	7332 hypothetical protein 0.8926
23469 Plus-3 0.8894	23269 hypothetical protein 0.8894	12836 EEP superfamily 0.8893	9912 hypothetical protein 0.8886

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FimP		Fms-interacting protein; This entry carries part of the crucial 144 N-terminal residues of the FmiP...	-	63.9244	4.80E-11	75 - 512	multi-dom	255539

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_46643	PHATR_46643	262699	285576	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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