24348 ICL_PEPM
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24348 chr_11a ICL_PEPM 499508 500858 - ICL_PEPM

Synonyms

NCBI ID Ensembl Genomes exon ID
7443313 Thaps24348.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0149

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0092
 0.42

Most Highly Correlated Transcripts

1773

hypothetical protein
0.8737

268314

hypothetical protein
0.8692

41655

Chloroa_b-bind
0.8646

19977

TRX_family
0.86

37934

GRX_PICOT_like
0.8518

26991

GRX_GRXh_1_2_like
0.8497

30701

PRK05279
0.8445

1807

hypothetical protein
0.8434

8232

hypothetical protein
0.8424

181

GT1_PIG-A_like
0.8343

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known... cl00435 189.236 4.55E-57 88 - 358 specific 119340
ICL_KPHMT superfamily Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C... - 189.236 4.55E-57 88 - 358 superfamily 260420

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 177813 188583 238585 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 GO:0050188 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0050188

phosphoenolpyruvate mutase activity

Details: 
Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.
GO Category: 
MF

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