2441 Thymidylate_kin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2441 chr_2 Thymidylate_kin 1012759 1014086 - Thymidylate_kin

Synonyms

NCBI ID Ensembl Genomes exon ID
7444633 Thaps2441.1, Thaps2441.2, Thaps2441.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0009

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0130
 0.40

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9419

26991

GRX_GRXh_1_2_like
0.9229

269110

hypothetical protein
0.9182

3730

hypothetical protein
0.9177

2690

WD40 superfamily
0.9139

20405

GRX_GRXh_1_2_like
0.9106

261400

NA
0.9096

2988

hypothetical protein
0.9062

35025

Lung_7-TM_R superfamily
0.9041

24343

hypothetical protein
0.9021

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the... cl17190 108.895 1.51E-28 38 - 244 specific 238835
NK superfamily Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of... - 108.895 1.51E-28 38 - 244 superfamily 266541
Thymidylate_kin Thymidylate kinase; Thymidylate kinase. - 155.912 1.44E-46 41 - 234 multi-dom 251166

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46855 PHATR_46855 198807 251860 Not available Cre03.g190750.t1.1 AT5G59440.2 263927

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004798 GO:0005524 GO:0006233 GO:0006235 -

GO:0004798

thymidylate kinase activity

Details: 
Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006233

dTDP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of dTDP, deoxyribosylthymine diphosphate (2'-deoxyribosylthymine5'-diphosphate).
GO Category: 
BP

GO:0006235

dTTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate.
GO Category: 
BP

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