24425 RhaT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24425 chr_12 RhaT 155949 157797 + RhaT

Synonyms

NCBI ID Ensembl Genomes exon ID
7443241 Thaps24425.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0275

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9169

36007

Aldolase_II superfamily
0.8704

261823

FIG superfamily
0.8692

38472

HA2
0.867

39941

PRK13357
0.8566

13393

PLN02321
0.8557

4524

DHQS
0.8555

38964

Chorismate_synthase
0.8456

268443

SAICAR_synt_Sc
0.8444

36525

PRK09427
0.8441

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and... - 66.0433 2.39E-12 145 - 445 multi-dom 223769

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45965 PHATRDRAFT_45965 182509 318991 435729 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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