24454 zf-DHHCThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24454	chr_12	zf-DHHC	366409	369459	-	zf-DHHC

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449406	Thaps24454.3, Thaps24454.8, Thaps24454.4, Thaps24454.7, Thaps24454.6, Thaps24454.2, Thaps24454.1, Thaps24454.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0261

Most Highly Correlated Transcripts

40200 TRX_reduct 0.9075	262821 AAA 0.9036	19059 SynMuv_product superfamily 0.8963	8500 PRP38 superfamily 0.895	4757 Leo1 0.8941	2622 hypothetical protein 0.8935
28004 hypothetical protein 0.8874	10487 hypothetical protein 0.887	33895 GlcD 0.8862	30701 PRK05279 0.886

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-DHHC		DHHC palmitoyltransferase; This family includes the well known DHHC zinc binding domain as well as...	cl19890	87.927	3.08E-20	393 - 503	specific	250688
zf-DHHC superfamily		DHHC palmitoyltransferase; This family includes the well known DHHC zinc binding domain as well as...	-	87.927	3.08E-20	393 - 503	superfamily	268243

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	178328	248113	Not available	Not available	Not available	486888

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0046872 -

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