24943 COG3899Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24943	chr_14	COG3899	969730	970422	+	COG3899

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451601	Thaps24943.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0474

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0061	0.42	65 13

Most Highly Correlated Transcripts

264262 COG3899 0.9262	262797 Sec7 0.8878	9860 hypothetical protein 0.8861	264276 Vps8 superfamily 0.8846	263610 COG3899 0.8818	33039 SpoT 0.8805
9270 hypothetical protein 0.8803	21655 hypothetical protein 0.8787	261430 Aa_trans superfamily 0.874	2240 hypothetical protein 0.8735

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG3899		Predicted ATPase [General function prediction only]	-	90.1499	6.73E-21	5 - 184	multi-dom	226415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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