25059 COG3349Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25059	chr_15	COG3349	750087	752445	+	COG3349

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450294	Thaps25059.3, Thaps25059.2, Thaps25059.1, Thaps25059.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0156

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0049	0.45	15 3100

Most Highly Correlated Transcripts

36235 p450 superfamily 0.8288	7304 hypothetical protein 0.8253	1520 hypothetical protein 0.8241	36669 TPT 0.8234	16295 FBPase 0.823	38964 Chorismate_synthase 0.8159
plastidpB 0.8132	4524 DHQS 0.8109	21865 hypothetical protein 0.8096	262977 NA 0.8091

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG3349		Uncharacterized conserved protein [Function unknown]	-	120.603	2.23E-29	76 - 623	multi-dom	225885

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_10438	PHATRDRAFT_10438	178142	298519	371132	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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