25177 TLC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25177 chr_16b TLC superfamily 36733 38965 + TLC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps25177.2, Thaps25177.1, Thaps25177.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

270249

(NTT3) hypothetical protein
1

bd258

(bd258) HU
0.9816

bd1652

(bd1652) ABC_ATPase superfamily
0.9194

bd1154

(bd1154) tpt
0.8851

25437

hypothetical protein
0.8833

37450

(SPP1) PqqL
0.882

bd208

(bd208) DUF3529
0.8772

ThpsCt017

(trnG(ucc))
0.8764

bd1306

(bd1306) NA
0.8753

ThpsCp133

(ycf46) Ycf46
0.8737

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TLC superfamily TLC ATP/ADP transporter; TLC ATP/ADP transporter. - 397.762 2.22E-130 178 - 654 superfamily 261954

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005471 GO:0005524 GO:0006810 GO:0016021 -

GO:0005471

ATP:ADP antiporter activity

Details: 
Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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