25214 PRK02224
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25214 chr_17 PRK02224 110820 116220 - PRK02224

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0243

Most Highly Correlated Transcripts

261324

PLN02724
0.9331

268118

WD40
0.9203

267979

HCO3_cotransp superfamily
0.9151

268550

(ALD1) ALDH-SF superfamily
0.9132

25270

hypothetical protein
0.9052

37609

PKc_like superfamily
0.9045

268136

COG1054
0.9017

25142

SWIRM
0.8995

263785

(Tp_TAZ4_PHD2_ZZ2) KAT11 superfamily
0.8951

269997

COG1112
0.8922

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK02224 chromosome segregation protein; Provisional - 69.6838 2.90E-12 384 - 943 multi-dom 179385

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50465 PHATRDRAFT_50465 136128 261164 462197 Cre14.g625802.t1.1 AT1G55250.1 322360

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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