25788 UPF0066 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25788	chr_22	UPF0066 superfamily	920478	921663	-	UPF0066 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449433	Thaps25788.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0299

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9005	9017 hypothetical protein 0.8775	8446 hypothetical protein 0.8768	263722 FIG superfamily 0.8711	268443 SAICAR_synt_Sc 0.8661	21705 hypothetical protein 0.8577
12899 AAA 0.8511	38609 HDAC_classIV 0.8497	25144 hypothetical protein 0.8495	18530 RNase_HII_bacteria_HII_like 0.8491

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0066 superfamily		Escherichia coli YaeB and related proteins; Uncharacterized protein family UPF0066. This domain...	-	107.188	2.81E-28	81 - 166	superfamily	260602

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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