260953 COG2423
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260953 chr_1 COG2423 1525824 1526895 + COG2423

Synonyms

NCBI ID Ensembl Genomes exon ID
7451513 Thaps260953.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

3353

FMN_dh
0.924

34585

PLN02389
0.9103

36208

(GDCT) PLN02319
0.8967

4370

hypothetical protein
0.8964

4819

Bestrophin superfamily
0.8884

4820

Bestrophin superfamily
0.8882

bd1820

(bd1820) Fasciclin
0.8847

261608

PLN02585
0.8838

28521

(GDCH) GCS_H
0.8832

233

CdCA1
0.882

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Shikimate_DH superfamily Shikimate / quinate 5-dehydrogenase; This family contains both shikimate and quinate dehydrogenases... - 175.628 1.94E-51 43 - 353 superfamily 267477
COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] - 205.233 9.78E-63 45 - 356 multi-dom 225280

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54222 PHATRDRAFT_54222 187231 320234 453525 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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