261019 HECTc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261019 chr_1 HECTc 1856419 1858101 - HECTc
NCBI ID Ensembl Genomes exon ID
7443129 Thaps261019.3, Thaps261019.2, Thaps261019.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0421
hypothetical protein
0.9398
PRK05279
0.9267
TPR
0.9238
Bromodomain
0.9197
COG0790
0.9186
hypothetical protein
0.9161
hypothetical protein
0.916
hypothetical protein
0.915
PKc_like superfamily
0.9121
AAA
0.912
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... cl00077 313.733 3.24E-102 165 - 512 specific 238033
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 313.733 3.24E-102 165 - 512 superfamily 260176
HECTc Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2... - 285.282 1.20E-91 191 - 511 multi-dom 214523
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15627 PHATRDRAFT_15627 199811 295109 107051 Cre08.g364550.t1.1 Not available 535457
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004842 GO:0005622 GO:0006464 GO:0006512 -

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA
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