261312 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261312 chr_2 MFS 730023 731953 + MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7450208 Thaps261312.1, Thaps261312.3, Thaps261312.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0004

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0062
 0.41

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9729

8036

hypothetical protein
0.85

263864

0.7976

6625

hypothetical protein
0.7911

12100

hypothetical protein
0.7842

5114

hypothetical protein
0.7746

6678

hypothetical protein
0.7703

12103

hypothetical protein
0.7694

4844

hypothetical protein
0.7686

261447

D-Amino acid dehydrogenase
0.7662

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 120.496 2.76E-30 113 - 512 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 120.496 2.76E-30 113 - 512 superfamily 119392
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 110.972 4.92E-27 115 - 474 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 461647 Cre16.g692116.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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