261414 2A0109
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261414 chr_2 2A0109 1248245 1250131 + 2A0109

Synonyms

NCBI ID Ensembl Genomes exon ID
7450399 Thaps261414.1, Thaps261414.3, Thaps261414.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0130

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0171
 0.35

Most Highly Correlated Transcripts

21308

RING
0.8821

22902

hypothetical protein
0.8818

25224

ATG13 superfamily
0.8796

4445

hypothetical protein
0.8785

261279

(DGT) PLN03242
0.8736

262163

hypothetical protein
0.8684

885

DUF544 superfamily
0.8663

13021

metallo-dependent_hydrolases superfamily
0.8636

3260

hypothetical protein
0.8627

4758

(Tp_HSF_2.2e) HSF_DNA-bind superfamily
0.8602

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 86.5989 1.08E-18 147 - 561 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 86.5989 1.08E-18 147 - 561 superfamily 119392
2A0109 phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major... - 206.503 7.00E-59 153 - 579 multi-dom 129965

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_39515 PHATRDRAFT_39515 184922 Not available 463311 Not available AT5G43360.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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