261495 Peptidase_M36
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261495 chr_2 Peptidase_M36 1793416 1796204 + Peptidase_M36

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232

Most Highly Correlated Transcripts

33984

PKc_like superfamily
0.9436

262826

DUF3608 superfamily
0.9431

12500

SNF2_N
0.9429

264679

Syja_N
0.9422

31437

Peptidase_M16 superfamily
0.9421

8657

hypothetical protein
0.939

22916

DUF1162 superfamily
0.9384

2941

hypothetical protein
0.9369

36273

Alpha_ANH_like_IV
0.9358

263947

SNF2_N
0.9355

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M36 Peptidase M36 family also known as fungalysin family; Peptidase M36 protease family, also known as... cl14813 275.405 7.26E-87 372 - 660 specific 189003
GluZincin superfamily Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4... - 275.405 7.26E-87 372 - 660 superfamily 265459
Peptidase_M36 Fungalysin metallopeptidase (M36); Fungalysin metallopeptidase (M36). - 378.16 6.05E-125 296 - 666 multi-dom 251105

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0005576 GO:0006508 GO:0008237 GO:0008270 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0005576

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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