261613 SPRY_RanBP_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261613 chr_2 SPRY_RanBP_like 2607915 2610176 - SPRY_RanBP_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7442414 Thaps261613.2, Thaps261613.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0412

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0135
 0.41

Most Highly Correlated Transcripts

bd1941

(bd1941) NA
0.8543

bd410

(bd410) HNHc
0.8327

bd1842

(bd1842) NA
0.8281

bd415

(bd415) arom_aa_hydroxylase superfamily
0.7856

bd1959

(bd1959) NA
0.7819

bd1808

(bd1808) NA
0.7806

bd1934

(bd1934) NA
0.7806

11667

hypothetical protein
0.778

5321

CobN-Mg_chel superfamily
0.7677

bd1793

(bd1793) NA
0.7671

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPRY_RanBP_like SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3; This family includes SPRY domains... cl02614 137.408 1.02E-37 594 - 722 specific 240465
SPRY superfamily SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit... - 137.408 1.02E-37 594 - 722 superfamily 261372
Leu_Phe_trans superfamily Leucyl/phenylalanyl-tRNA protein transferase; Leucyl/phenylalanyl-tRNA protein transferase. - 97.034 5.21E-23 171 - 307 superfamily 247871

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45060 PHATRDRAFT_45060 266684 Not available Not available Cre09.g387801.t1.1 AT1G35470.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016755 GO:0030163 -

GO:0016755

transferase activity, transferring amino-acyl groups

Details: 
Catalysis of the transfer of an amino-acyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0030163

protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO Category: 
BP

Add comment

Log in to post comments