261702 ACD_sHsps-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261702 chr_3 ACD_sHsps-like 425678 426570 + ACD_sHsps-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7441764 Thaps261702.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0113

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.9245

25127

hypothetical protein
0.866

bd1890

(bd1890) NA
0.8622

bd153

(bd153) NA
0.8612

bd824

(bd824) NA
0.8573

7335

hypothetical protein
0.8513

bd930

(bd930) HA
0.844

270222

0.8422

3330

RGS
0.8418

bd1875

(bd1875) NA
0.8326

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps... cl00175 82.602 3.93E-20 202 - 283 specific 107221
alpha-crystallin-Hsps_p23-like superfamily alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a... - 82.602 3.93E-20 202 - 283 superfamily 260235
IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover,... - 77.8022 6.77E-18 166 - 296 multi-dom 223149

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

Not available -

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