261882 Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261882	chr_3	Thioredoxin_like superfamily	1680015	1680580	-	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps261882.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0019

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0163	0.38	0.012 41

Most Highly Correlated Transcripts

3733 hypothetical protein 0.996	270222 0.9502	9776 hypothetical protein 0.9376	8058 hypothetical protein 0.9191	23278 GrpE 0.9179	268192 Zip superfamily 0.9175
260762 hypothetical protein 0.9143	2211 hypothetical protein 0.9111	37934 GRX_PICOT_like 0.907	39841 ArsA_ATPase 0.907

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	59.8608	1.41E-12	119 - 177	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	178883	241641	197665	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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