262031 FH2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262031 chr_4 FH2 223540 228639 + FH2

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0260

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0053
 0.56

Most Highly Correlated Transcripts

bd137

(bd137) Motor_domain superfamily
0.9449

bd1313

(bd1313) psbH
0.9385

bd794

(bd794) NA
0.9228

bd2073

(bd2073) psbB
0.9187

bd668

(bd668) NA
0.9147

bd1092

(bd1092) NA
0.905

bd1378

(bd1378) atpI
0.8947

261056

(APB3) Adaptin_N
0.8931

1778

hypothetical protein
0.8926

bd1290

(bd1290) atpH
0.892

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FH2 Formin Homology 2 Domain; Formin Homology 2 Domain. cl19758 242.572 2.94E-70 1225 - 1602 specific 251141
FH2 superfamily Formin Homology 2 Domain; Formin Homology 2 Domain. - 242.572 2.94E-70 1225 - 1602 superfamily 268111
DUF2360 superfamily Predicted coiled-coil domain-containing protein (DUF2360); This is the conserved 140 amino acid... - 64.7291 1.08E-11 1158 - 1206 superfamily 255793

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54510 PHATRDRAFT_54510 193211 260762 Not available Not available AT1G31810.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003779 GO:0016043 -

GO:0003779

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

GO:0016043

cellular component organization

Details: 
A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO Category: 
BP

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