262136 Tim44 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262136 chr_4 Tim44 superfamily 897796 899397 - Tim44 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447922 Thaps262136.1, Thaps262136.3, Thaps262136.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

5105

hypothetical protein
0.9079

262977

NA
0.898

41655

Chloroa_b-bind
0.8945

4524

DHQS
0.8934

13393

PLN02321
0.8904

268062

PRK14293
0.8856

261400

NA
0.883

37497

cysE
0.8811

40200

TRX_reduct
0.8796

22186

MFS
0.8789

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tim44 superfamily Tim44-like domain; Tim44 is an essential component of the machinery that mediates the translocation... - 108.424 2.41E-26 113 - 455 superfamily 263739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44351 PHATRDRAFT_44351 205776 43819 Not available Not available AT2G20510.1 310143

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005744 GO:0006886 GO:0015450 -

GO:0005744

mitochondrial inner membrane presequence translocase complex

Details: 
The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor.
GO Category: 
CC

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0015450

P-P-bond-hydrolysis-driven protein transmembrane transporter activity

Details: 
Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.
GO Category: 
MF

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