262359 Sec7
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262359 chr_4 Sec7 2381312 2384740 + Sec7

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0195

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

263580

(Tp_CSF1) regulator [Rayko]
0.9366

37862

S_TKc
0.9294

262127

NADB_Rossmann superfamily
0.9255

262751

ERO1
0.9248

3320

Abhydrolase_5
0.9236

8518

hypothetical protein
0.9234

12500

SNF2_N
0.9216

8244

Lipase superfamily
0.9182

4842

Cas1_AcylT superfamily
0.9152

263504

sensory_box
0.9134

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec7 Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... cl00136 194.364 3.18E-57 272 - 429 specific 238100
Sec7 superfamily Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... - 194.364 3.18E-57 272 - 429 superfamily 260210
Sec7_N superfamily Guanine nucleotide exchange factor in Golgi transport N-terminal; The full-length Sec7 functions... - 125.018 1.28E-32 14 - 156 superfamily 257293
Sec7_N superfamily Guanine nucleotide exchange factor in Golgi transport N-terminal; The full-length Sec7 functions... - 125.018 1.28E-32 14 - 156 superfamily 257293

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50615 PHATRDRAFT_50615 206929 262522 Not available Not available AT1G13980.2 528113

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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