262464 NrfG
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262464 chr_5 NrfG 686703 689861 - NrfG

Synonyms

NCBI ID Ensembl Genomes exon ID
7446417 Thaps262464.2, Thaps262464.1, Thaps262464.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0361

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0084
 0.43

Most Highly Correlated Transcripts

38707

Aldolase_Class_I superfamily
0.8561

36007

Aldolase_II superfamily
0.8358

bd686

(bd686) Glyco_transf_22 superfamily
0.8337

bd923

(bd923) NA
0.8319

4524

DHQS
0.8295

268062

PRK14293
0.8224

bd524

(bd524) NA
0.8217

23242

PRK00142
0.8196

261823

FIG superfamily
0.8129

2318

Bromodomain
0.8105

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NrfG FOG: TPR repeat [General function prediction only] - 64.8673 1.92E-11 533 - 814 multi-dom 223533

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43587 PHATRDRAFT_43587 186421 225858 457455 Cre09.g416200.t1.2 AT3G17040.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005622 GO:0006396 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0006396

RNA processing

Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO Category: 
BP

Add comment

Log in to post comments