26250 (RL26) KOW_RPL26
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
26250 chr_5 (RL26) KOW_RPL26 1226627 1227074 + KOW_RPL26
NCBI ID Ensembl Genomes exon ID
7450078 Thaps26250.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0205
0.26
(RS15A) PTZ00158
0.9523
(RS15B) PTZ00096
0.9495
(RL11A) PTZ00156
0.9441
(RL14) Ribosomal_L14e
0.9421
(RS4) PLN00036
0.9316
(rpl23) PTZ00054
0.9307
(RS29) Ribosomal_S14 superfamily
0.9296
(RL23a) PTZ00191
0.9266
(RS24) PTZ00071
0.922
(RS16) PLN00210
0.9208
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KOW_RPL26 KOW motif of Ribosomal Protein L26; RPL26 and its bacterial paralogs RPL24 have a KOW motif at... cl00354 55.5986 1.84E-11 52 - 90 specific 240513
KOW superfamily KOW: an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese); KOW domain is... - 55.5986 1.84E-11 52 - 90 superfamily 260377
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11032 PHATRDRAFT_11032 272268 263736 417676 Cre01.g040000.t1.2 AT5G67510.1 286387
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0006412 GO:0015934 GO:0005622 GO:0005840 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

large ribosomal subunit

Details: 
The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
GO Category: 
CC

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC
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