262564 VATPase_H superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262564 chr_5 VATPase_H superfamily 1436706 1438270 - VATPase_H superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453219 Thaps262564.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0211

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0271
 0.35

Most Highly Correlated Transcripts

8038

hypothetical protein
0.9048

40522

(VAT1) V-ATPase_V1_B
0.9025

7505

hypothetical protein
0.9015

789

S_TKc
0.8994

11184

hypothetical protein
0.8991

6130

hypothetical protein
0.8961

32945

(SDH1) sdhB
0.8959

29053

V-ATPase_C superfamily
0.8945

11268

hypothetical protein
0.8944

23818

hypothetical protein
0.8939

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VATPase_H superfamily VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the... - 198.779 2.01E-57 203 - 519 superfamily 238159

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 272683 233817 Not available Not available Not available 505321

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0003936 GO:0046933 GO:0046961 -

GO:0003936

NA

Details: 
NA
GO Category: 
NA

GO:0046933

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

GO:0046961

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

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