263298 Chitin_synth_CThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263298	chr_7	Chitin_synth_C	1859513	1861999	-	Chitin_synth_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450610	Thaps263298.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0493

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0167	0.37	0.00017 520

Most Highly Correlated Transcripts

263301 Chitin_synth_C 0.9873	bd1770 (bd1770) NA 0.8557	264903 (CHT1_1) GH18_chitinase-like superfamily 0.8447	5858 hypothetical protein 0.8309	22971 hypothetical protein 0.8257	6635 hypothetical protein 0.8252
23411 (Tp_HSF_2.7g) regulator [Rayko] 0.8227	14030 S_TKc 0.8187	3006 hypothetical protein 0.8134	21463 hypothetical protein 0.8129

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chitin_synth_C		C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-...	cl11394	299.993	3.66E-95	327 - 658	specific	133033
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	299.993	3.66E-95	327 - 658	superfamily	264347
nodulat_NodC		chitooligosaccharide synthase NodC; Members of this family are NodC, an N-...	-	81.3196	1.28E-16	308 - 770	multi-dom	211965

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0016758 GO:0004100 -

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