263480 COG4770
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
263480 chr_9 COG4770 102956 105706 - COG4770
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0130
Normalized Mean Residue
Thaps_bicluster_0264
0.37
ERG4_ERG24 superfamily
0.908
CBS_pair superfamily
0.898
(PCC1) COG4799
0.8918
(PCB1) COG4799
0.8904
AAT_I superfamily
0.8799
(UGDH2) Ugd
0.8757
hypothetical protein
0.8702
hypothetical protein
0.87
(GCD1) GCD
0.8699
PDI_a_family
0.8694
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-... cl11404 85.1603 8.20E-20 728 - 794 specific 133459
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 85.1603 8.20E-20 728 - 794 superfamily 264355
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 218.71 1.27E-65 225 - 445 superfamily 266590
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 167.275 1.20E-48 112 - 219 superfamily 249744
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 167.275 1.20E-48 112 - 219 superfamily 249744
Biotin_carb_C Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... cl08365 127.529 2.36E-34 459 - 575 specific 214878
Biotin_carb_C superfamily Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... - 127.529 2.36E-34 459 - 575 superfamily 263607
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] - 667.073 0 112 - 794 multi-dom 227111
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51245 PHATRDRAFT_51245 136622 209152 Not available Not available AT1G03090.2 352373
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0009374 GO:0005524 GO:0008152 GO:0016874 GO:0004658 -

biotin binding

Details: 
Interacting selectively and non-covalently with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

ligase activity

Details: 
Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

propionyl-CoA carboxylase activity

Details: 
Catalysis of the reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA.
GO Category: 
MF
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