263868 KISc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263868 chr_12 KISc 200682 202293 - KISc

Synonyms

NCBI ID Ensembl Genomes exon ID
7443247 Thaps263868.4, Thaps263868.1, Thaps263868.2, Thaps263868.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0078

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0086
 0.47

Most Highly Correlated Transcripts

7307

hypothetical protein
0.9266

23522

DUF1032 superfamily
0.915

22301

(PMM1) PLN02423
0.8967

25621

hypothetical protein
0.8836

22325

hypothetical protein
0.8785

32706

VRG4
0.8752

7304

hypothetical protein
0.8734

262204

Nudix_Hydrolase superfamily
0.8692

260808

0.8684

268221

(Tp_Myb1R10) MYB DNA binding protein/ transcription factor-like protein
0.8673

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger... cl00286 331.507 2.20E-110 1 - 291 specific 238054
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 331.507 2.20E-110 1 - 291 superfamily 260327
KIP1 Kinesin-like protein [Cytoskeleton] - 233.477 7.54E-70 2 - 445 multi-dom 227392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003777 GO:0005524 GO:0005875 GO:0007018 GO:0008574 -

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0005875

microtubule associated complex

Details: 
Any multimeric complex connected to a microtubule.
GO Category: 
CC

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

GO:0008574

plus-end-directed microtubule motor activity

Details: 
Catalysis of movement along a microtubule toward the plus end, coupled to the hydrolysis of ATP (or GTP).
GO Category: 
MF

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