263937 Glyco_hydrolase_16 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263937 chr_12 Glyco_hydrolase_16 superfamily 940874 942696 - Glyco_hydrolase_16 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448024 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0104
 0.31

Most Highly Correlated Transcripts

7677

(DDE) diadinoxanthin de-epoxidase
0.8722

bd687

(bd687) NA
0.8679

bd718

(bd718) PRK10387
0.8651

6413

lipoyl_domain
0.8625

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8614

bd1306

(bd1306) NA
0.8595

bd218

(bd218) Chloroa_b-bind superfamily
0.8553

bd624

(bd624) Glyco_transf_34 superfamily
0.8463

bd208

(bd208) DUF3529
0.8446

bd1820

(bd1820) Fasciclin
0.8445

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glyco_hydrolase_16 superfamily glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that... - 214.867 2.48E-66 47 - 365 superfamily 260271
SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] - 68.2642 6.04E-13 27 - 384 multi-dom 225182

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48300 PHATRDRAFT_48300 186340 208405 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments