264439 DadAThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264439	chr_17	DadA	271245	272883	+	DadA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453148	Thaps264439.4, Thaps264439.3, Thaps264439.5, Thaps264439.1, Thaps264439.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0421

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0010	0.38	14000000 370

Most Highly Correlated Transcripts

bd415 (bd415) arom_aa_hydroxylase superfamily 0.8915	20906 hypothetical protein 0.8748	bd1841 (bd1841) CAP10 superfamily 0.8687	21090 hypothetical protein 0.8675	6476 hypothetical protein 0.8605	bd721 (bd721) NA 0.8532
8734 hypothetical protein 0.8525	1102 hypothetical protein 0.8507	bd410 (bd410) HNHc 0.8481	35390 (KAR3) NADB_Rossmann superfamily 0.8442

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	66.7769	2.44E-12	34 - 452	superfamily	267487
DadA		Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	-	161.221	1.42E-44	34 - 457	multi-dom	223737

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	255657	249187	Not available	Not available	552420

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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