264678 CysJ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264678 chr_20 CysJ 188702 190789 + CysJ

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0237

Most Highly Correlated Transcripts

40200

TRX_reduct
0.9394

262305

DnaJ_bact
0.9203

24790

Nitro_FMN_reductase superfamily
0.9201

22507

hypothetical protein
0.9198

267979

HCO3_cotransp superfamily
0.9192

1014

hypothetical protein
0.9186

264321

PP2Cc
0.9166

35136

NA
0.9157

23550

hypothetical protein
0.9122

13393

PLN02321
0.911

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 389.695 1.92E-129 221 - 615 superfamily 263080
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 110.554 2.82E-28 6 - 135 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 110.554 2.82E-28 6 - 135 superfamily 260423
CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] - 410.656 2.97E-135 1 - 615 multi-dom 223446

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9283 PHATRDRAFT_9283 271841 327114 468282 Cre01.g039350.t1.2 AT4G24520.2 360099

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0016491 GO:0010181 GO:0003958 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0003958

NADPH-hemoprotein reductase activity

Details: 
Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.
GO Category: 
MF

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