268010 (RPC2) PRK08565
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268010 chr_1 (RPC2) PRK08565 1244718 1248542 - PRK08565
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232
Normalized Mean Residue
Thaps_bicluster_0119
0.42
hypothetical protein
0.912
HA2
0.902
YihA_EngB
0.8951
hypothetical protein
0.895
hypothetical protein
0.8943
hypothetical protein
0.8927
DRE_TIM_metallolyase superfamily
0.8916
NGN_Euk
0.8907
hypothetical protein
0.8907
MogA_MoaB
0.8893
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNA_pol_B_RPB2 superfamily RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 1102.24 0 2 - 1103 superfamily 238353
RNA_pol_B_RPB2 superfamily RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 1102.24 0 2 - 1103 superfamily 238353
RNA_pol_Rpb2_4 superfamily RNA polymerase Rpb2, domain 4; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 88.8894 5.77E-21 506 - 567 superfamily 113341
RNA_pol_Rpb2_5 superfamily RNA polymerase Rpb2, domain 5; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 59.9033 5.39E-11 592 - 631 superfamily 191029
RNA_pol_Rpb2_5 superfamily RNA polymerase Rpb2, domain 5; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 59.9033 5.39E-11 592 - 631 superfamily 191029
PRK08565 DNA-directed RNA polymerase subunit B; Provisional - 1010.26 0 2 - 1108 multi-dom 236291
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54289 PHATRDRAFT_54289 277325 318148 427295 Cre02.g075150.t1.2 AT5G45140.1 340380
KEGG description KEGG Pathway
RNA polymerase map03020
GO:0003677 GO:0003899 GO:0006350 GO:0003900 GO:0003901 GO:0003902 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

DNA-directed RNA polymerase activity

Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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