268179 DTW superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268179	chr_2	DTW superfamily	343776	344666	+	DTW superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448633	Thaps268179.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0292

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0097	0.39	0.37 0.009

Most Highly Correlated Transcripts

270004 hypothetical protein 0.9075	268443 SAICAR_synt_Sc 0.9057	24879 hypothetical protein 0.8959	267979 HCO3_cotransp superfamily 0.8884	22627 hypothetical protein 0.8856	35682 Prefoldin superfamily 0.8845
42533 N2227 superfamily 0.8784	7084 Cupin_8 superfamily 0.8752	8397 hypothetical protein 0.8735	42652 DRG 0.8717

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DTW superfamily		DTW domain; This presumed domain is found in bacterial and eukaryotic proteins. Its function is...	-	113.661	1.86E-30	27 - 236	superfamily	260840

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	233401	231819	96624	Not available	AT2G41750.1	519650

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments