268410 (CDK1) STKc_CDK_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268410 chr_3 (CDK1) STKc_CDK_like 239099 240492 - STKc_CDK_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7442471 Thaps268410.4, Thaps268410.3, Thaps268410.2, Thaps268410.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0312

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0273
 0.40

Most Highly Correlated Transcripts

7335

hypothetical protein
0.9526

7336

hypothetical protein
0.9461

bd1802

(bd1802) NA
0.8885

7334

hypothetical protein
0.8883

bd739

(bd739) NA
0.8858

bd1877

(bd1877) NA
0.8762

21090

hypothetical protein
0.8405

bd1891

(bd1891) COG3899
0.8385

bd738

(bd738) NA
0.836

268300

DUF493
0.8359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; Serine/Threonine... cl09925 515.496 0 4 - 287 specific 173733
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 515.496 0 4 - 287 superfamily 263920
PLN00009 cyclin-dependent kinase A; Provisional - 439.638 2.18E-155 1 - 293 multi-dom 177649

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20262 PHATRDRAFT_20262 182088 323700 444655 Cre10.g465900.t1.2 AT3G48750.1 349235

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0004674 GO:0004682 GO:0004691 GO:0005952 GO:0005956 GO:0008603 GO:0008605 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

GO:0004682

NA

Details: 
NA
GO Category: 
NA

GO:0004691

cAMP-dependent protein kinase activity

Details: 
Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of cAMP.
GO Category: 
MF

GO:0005952

cAMP-dependent protein kinase complex

Details: 
An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.
GO Category: 
CC

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008603

cAMP-dependent protein kinase regulator activity

Details: 
Modulation of the activity of the enzyme cAMP-dependent protein kinase.
GO Category: 
MF

GO:0008605

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments