268560 FNR_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268560	chr_3	FNR_like superfamily	2096565	2098916	+	FNR_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443781	Thaps268560.1, Thaps268560.3, Thaps268560.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0160

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0036	0.41

Most Highly Correlated Transcripts

12836 EEP superfamily 0.8938	bd874 (bd874) NA 0.8847	bd392 (bd392) DEXDc 0.8699	1079 hypothetical protein 0.8679	22928 hypothetical protein 0.8675	22533 hypothetical protein 0.8673
5614 hypothetical protein 0.8643	23339 hypothetical protein 0.8633	1101 hypothetical protein 0.8613	21791 hypothetical protein 0.8612

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FNR_like superfamily		Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a...	-	267.602		266 - 720	superfamily	263080
Flavodoxin_1			cl00438	64.3297		80 - 180	specific	249722
FMN_red superfamily			-	64.3297		80 - 180	superfamily	260423

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43649	PHATRDRAFT_43649	269392	204414	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0016491 GO:0010181 GO:0003958 -

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