269199 crotonase-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269199 chr_7 crotonase-like 236397 237241 + crotonase-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7446171 Thaps269199.3, Thaps269199.2, Thaps269199.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0467

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0265
 0.39

Most Highly Correlated Transcripts

bd1749

(bd1749) NA
0.9153

4599

hypothetical protein
0.8491

bd838

(bd838) NA
0.8436

19158

GRX_PICOT_like
0.8278

bd945

(bd945) COG3899
0.8136

bd954

(bd954) NA
0.8136

bd1891

(bd1891) COG3899
0.8067

21685

PLN02651
0.8058

9040

ELP3
0.7969

24293

hypothetical protein
0.7965

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of... cl18948 168.508 1.26E-51 24 - 209 specific 119339
crotonase-like superfamily Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of... - 168.508 1.26E-51 24 - 209 superfamily 267301
PRK05870 enoyl-CoA hydratase; Provisional - 95.5626 1.44E-23 9 - 243 multi-dom 180298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT4G16210.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003824 GO:0008152 GO:0004300 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0004300

enoyl-CoA hydratase activity

Details: 
Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2-enoyl-CoA + H2O.
GO Category: 
MF

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