26957 Sec63
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
26957 chr_2 Sec63 375453 377621 - Sec63
NCBI ID Ensembl Genomes exon ID
7442233 Thaps26957.1, Thaps26957.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052
FBPase
0.8985
Sec1
0.8967
AAA
0.8857
Chorismate_synthase
0.8827
DHQS
0.8778
FtsZ_type1
0.8698
hypothetical protein
0.8677
hypothetical protein
0.8668
hypothetical protein
0.8632
hypothetical protein
0.857
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 80.2821 1.73E-18 105 - 159 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 80.2821 1.73E-18 105 - 159 superfamily 261333
Sec63 Sec63 Brl domain; This domain (also known as the Brl domain) is required for assembly of functional... cl19361 175.503 1.39E-49 228 - 536 specific 251597
Sec63 superfamily Sec63 Brl domain; This domain (also known as the Brl domain) is required for assembly of functional... - 175.503 1.39E-49 228 - 536 superfamily 267714
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27039 PHATRDRAFT_27039 260378 207483 232647 Cre16.g657850.t1.2 AT1G79940.3 349537
KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141
GO:0006457 GO:0031072 GO:0051082 GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0000810 GO:0004787 GO:0008722 GO:0008758 GO:0008796 GO:0008828 GO:0016462 GO:0016818 GO:0019176 GO:0019177 -

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

heat shock protein binding

Details: 
Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO Category: 
MF

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

diacylglycerol diphosphate phosphatase activity

Details: 
Catalysis of the reaction: a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycerol 3-phosphate + phosphate.
GO Category: 
MF

thiamine-pyrophosphatase activity

Details: 
Catalysis of the reaction: TDP + H2O = TMP + phosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

UDP-2,3-diacylglucosamine hydrolase activity

Details: 
Catalysis of the reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + UMP.
GO Category: 
MF

bis(5'-nucleosyl)-tetraphosphatase activity

Details: 
Catalysis of the hydrolysis of P(1),P(4)-bis(5'-nucleosyl)tetraphosphate into two nucleotides.
GO Category: 
MF

dATP pyrophosphohydrolase activity

Details: 
Catalysis of the reaction: deoxy-ATP + H2O = dAMP + diphosphate.
GO Category: 
MF

pyrophosphatase activity

Details: 
Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
GO Category: 
MF

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

Details: 
Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.
GO Category: 
MF

dihydroneopterin monophosphate phosphatase activity

Details: 
Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.
GO Category: 
MF

dihydroneopterin triphosphate pyrophosphohydrolase activity

Details: 
Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.
GO Category: 
MF
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