269976 SRPBCC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269976 chr_19a_19 SRPBCC superfamily 194575 195936 - SRPBCC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449892 Thaps269976.1, Thaps269976.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0302

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0229
 0.40

Most Highly Correlated Transcripts

bd1946

(bd1946) NA
0.9452

bd1877

(bd1877) NA
0.9416

bd930

(bd930) HA
0.9255

261802

Aldo_ket_red
0.8574

bd1840

(bd1840) NA
0.8553

20752

hypothetical protein
0.8531

268486

Glyco_transf_22 superfamily
0.8462

7335

hypothetical protein
0.8447

264732

0.8426

264090

AAA_12
0.8396

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRPBCC superfamily START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains... - 99.8535 1.52E-26 58 - 198 superfamily 265438

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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