270092 Chloroa_b-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270092 chr_22 Chloroa_b-bind superfamily 577467 578483 + Chloroa_b-bind superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442860 Thaps270092.2, Thaps270092.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0129
 0.19

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.9787

bd1645

(bd1645) tpt
0.9661

7916

(FCP_2) Chloroa_b-bind superfamily
0.9633

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9608

bd1820

(bd1820) Fasciclin
0.9605

3327

hypothetical protein
0.9573

bd1342

(bd1342) psaL
0.9529

4882

(Lhcr4) fucoxanthin chl a/c light-harvesting protein
0.9529

6139

Chloroa_b-bind superfamily
0.9523

3815

(Lhca6) Chloroa_b-bind
0.9517

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 117.151 5.56E-32 2 - 228 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 170453 321664 443305 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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