28984 (APS3) APS2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28984 chr_7 (APS3) APS2 1345938 1347131 + APS2

Synonyms

NCBI ID Ensembl Genomes exon ID
7447119 Thaps28984.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9535

41655

Chloroa_b-bind
0.9214

9115

DnaJ
0.9184

30701

PRK05279
0.9096

269624

TIM_phosphate_binding superfamily
0.9043

4064

NADB_Rossmann superfamily
0.9028

261400

NA
0.8974

33075

RimI
0.8917

33219

Sdh5
0.8903

268187

(ycf19_1) COG0762
0.8901

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] cl02092 163.351 3.79E-51 1 - 161 specific 227363
Clat_adaptor_s superfamily Clathrin adaptor complex small chain; Clathrin adaptor complex small chain. - 163.351 3.79E-51 1 - 161 superfamily 261170

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
14597 PHATRDRAFT_14536 PHATRDRAFT_14536 215305 327170 Not available Not available AT3G50860.1 298766

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006886 GO:0030125 -

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0030125

clathrin vesicle coat

Details: 
A clathrin coat found on a vesicle.
GO Category: 
CC

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