29547 (PNP1) PNP_UDP_1 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
29547	chr_10	(PNP1) PNP_UDP_1 superfamily	1067252	1068414	-	PNP_UDP_1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450784	Thaps29547.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0138

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0171	0.35	0.00000000000001 1200

Most Highly Correlated Transcripts

4100 hypothetical protein 0.8785	11826 Zip superfamily 0.8539	13021 metallo-dependent_hydrolases superfamily 0.818	262163 hypothetical protein 0.8139	plastidpF 0.8091	261279 (DGT) PLN03242 0.8027
3167 hypothetical protein 0.8012	bd706 (bd706) NA 0.7981	4569 hypothetical protein 0.7955	1218 Aa_trans superfamily 0.793

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PNP_UDP_1 superfamily		Phosphorylase superfamily; Members of this family include: purine nucleoside phosphorylase (PNP)...	-	293.635	2.41E-98	2 - 243	superfamily	260338
Pnp		Purine nucleoside phosphorylase [Nucleotide transport and metabolism]	-	200.971	1.92E-62	2 - 243	multi-dom	223084

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_15948	PHATRDRAFT_15948	189350	213153	Not available	Not available	Not available	355309

KEGG

KEGG description	KEGG Pathway
Biosynthesis of secondary metabolites	map01110

GO Terms

GO:0016763 GO:0004731 GO:0006139 -

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