31012 (Cpx1) PLN02873
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31012 chr_1 (Cpx1) PLN02873 2928943 2929858 - PLN02873

Synonyms

NCBI ID Ensembl Genomes exon ID
7449099 Thaps31012.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0260
 0.25

Most Highly Correlated Transcripts

261608

PLN02585
0.9592

270378

hypothetical protein
0.9434

268480

(GGPS1) Trans_IPPS_HT
0.9401

270346

hypothetical protein
0.9399

5077

PLN00015
0.9351

8248

HopJ superfamily
0.9327

9021

(PbgD) hemC
0.9324

3326

TauD
0.9313

32201

Cob-chelat-sub
0.9257

575

PRK00062
0.924

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02873 coproporphyrinogen-III oxidase cl19362 524.582 0 37 - 304 specific 215471
Coprogen_oxidas superfamily Coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase. - 524.582 0 37 - 304 superfamily 267715

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15068 PHATRDRAFT_15068 179047 186751 432924 Cre02.g085450.t1.2 AT1G03475.1 563374

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004109 GO:0006779 -

GO:0004109

coproporphyrinogen oxidase activity

Details: 
Catalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX.
GO Category: 
MF

GO:0006779

porphyrin-containing compound biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO Category: 
BP

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